One of the advantages of submitting jobs to the HPC cluster to run with qsub is that the stdout and stderr gets logged; this is not the case when running the scripts in the active session. To get around this, need to look into a method to use tee or similar to catch all stdout and sterr printed to console when running the pipeline scripts 'interactively' so that these logs can be created.
One of the advantages of submitting jobs to the HPC cluster to run with qsub is that the stdout and stderr gets logged; this is not the case when running the scripts in the active session. To get around this, need to look into a method to use
teeor similar to catch all stdout and sterr printed to console when running the pipeline scripts 'interactively' so that these logs can be created.