iplantPreprocForDataObjOpen: imv file.fastq to itmp, iget from itmp to tmp, decompress, iput from tmp to item, imv from itmp to file.fastq
file is fetched
iplantPostProcForOpen: repeat decompress procedure but for compression.
If iget command could be intercepted and modified to fetch the file from the itmp location, then the "repeat decompress procedure but for compression" could be eliminated.
Current procedure:
iget file.fastq:
If iget command could be intercepted and modified to fetch the file from the itmp location, then the "repeat decompress procedure but for compression" could be eliminated.