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stianlagstad / chimeraviz

chimeraviz is an R package that automates the creation of chimeric RNA visualizations.
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now also setting fusion@inframe ... #20

Closed plijnzaad closed 4 years ago

plijnzaad commented 6 years ago

... but only if column PROT_FUSION_TYPE is available (i.e. when reading star-fusion.fusion_predictions.abridged.annotated.coding_effect.tsv ) If the (default) "star-fusion.fusion_predictions.abridged.tsv" file is used, inframe remains NA (and a warning is issued) now also setting fusion@inframe ...

(cherry picked from commit a8fc9cbb239d1c498cdbf3bf97885cafb02e8977)

stianlagstad commented 4 years ago

Closing this as the changes are already in master.