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stianlagstad / chimeraviz

chimeraviz is an R package that automates the creation of chimeric RNA visualizations.
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Allow plot_fusion without coverage. #65

Closed stianlagstad closed 5 years ago

stianlagstad commented 5 years ago

plus fix linter issues

Ref https://github.com/stianlagstad/chimeraviz/issues/61

codecov-io commented 5 years ago

Codecov Report

Merging #65 into RELEASE_3_8 will decrease coverage by 2.33%. The diff coverage is 29.09%.

Impacted file tree graph

@@               Coverage Diff               @@
##           RELEASE_3_8      #65      +/-   ##
===============================================
- Coverage         65.5%   63.17%   -2.34%     
===============================================
  Files               21       21              
  Lines             4514     4559      +45     
===============================================
- Hits              2957     2880      -77     
- Misses            1557     1679     +122
Impacted Files Coverage Δ
R/utilities.R 66.12% <ø> (+0.53%) :arrow_up:
R/plot_circle.R 74.07% <100%> (ø) :arrow_up:
R/import_oncofuse.R 91.42% <100%> (+0.16%) :arrow_up:
R/import_defuse.R 93.04% <100%> (ø) :arrow_up:
R/plot_fusion.R 33.61% <22%> (-8.34%) :arrow_down:

Continue to review full report at Codecov.

Legend - Click here to learn more Δ = absolute <relative> (impact), ø = not affected, ? = missing data Powered by Codecov. Last update 5ee9eb3...57e50f1. Read the comment docs.

codecov-io commented 5 years ago

Codecov Report

Merging #65 into RELEASE_3_8 will decrease coverage by 2.33%. The diff coverage is 29.09%.

Impacted file tree graph

@@               Coverage Diff               @@
##           RELEASE_3_8      #65      +/-   ##
===============================================
- Coverage         65.5%   63.17%   -2.34%     
===============================================
  Files               21       21              
  Lines             4514     4559      +45     
===============================================
- Hits              2957     2880      -77     
- Misses            1557     1679     +122
Impacted Files Coverage Δ
R/utilities.R 66.12% <ø> (+0.53%) :arrow_up:
R/plot_circle.R 74.07% <100%> (ø) :arrow_up:
R/import_oncofuse.R 91.42% <100%> (+0.16%) :arrow_up:
R/import_defuse.R 93.04% <100%> (ø) :arrow_up:
R/plot_fusion.R 33.61% <22%> (-8.34%) :arrow_down:

Continue to review full report at Codecov.

Legend - Click here to learn more Δ = absolute <relative> (impact), ø = not affected, ? = missing data Powered by Codecov. Last update 5ee9eb3...57e50f1. Read the comment docs.