stjude-biohackathon / peakPeekeR

Peak calling optimization via real time results assessment and interactive parameter adjustment.
MIT License
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Determine which parameters matter/should be added for peak callers of interest #6

Open j-andrews7 opened 2 years ago

j-andrews7 commented 2 years ago

Many of the peak callers mentioned in #2 have a ton of parameters. Some matter, some don't. Making note of which ones are worth making available to the user and which should just use default settings will be important.

Pretty easy to adjust later, so we can throw the obvious ones up at first and go from there.

j-andrews7 commented 2 years ago

13 took care of this for MACS2.