stjude-dnb-binfcore / sc-rna-seq-snap

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Test `cellranger-analysis` (K1/2) #28

Open AntoniaChroni opened 5 hours ago

AntoniaChroni commented 5 hours ago

What scientific question/module of analysis is your analysis addressing?

This is to test cellranger-analysis module after adding the flag --force_cells=8000 to run CellRanger.

What GitHub issue does your pull request address?

Closes #27.

Directions for reviewers

Tell potential reviewers what kind of feedback you are soliciting.

Which areas should receive a particularly close look?

Please follow the instructions in the README file and change the parameters as necessary. Please run the module and confirm successful completion.

Reproducibility Checklist

Documentation Checklist