Closed mcrusch closed 3 years ago
Merge the contamination lists and tie BAMs into a single output file each.
Contamination lists can be catted and then gzipped. The tie bams can be merged.
This should be implemented in the cwl workflow and in the setup script. The dxapp.json may need to be updated to change the output spec.
Merge the contamination lists and tie BAMs into a single output file each.
Contamination lists can be catted and then gzipped. The tie bams can be merged.
This should be implemented in the cwl workflow and in the setup script. The dxapp.json may need to be updated to change the output spec.