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stjude / proteinpaint

Data visualization and analysis framework focused on phenotype-molecular data integration at cohort level.
https://proteinpaint.stjude.org/
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in gdc mds3 tk, disable geneExpression term from filter #1681

Closed xzhou82 closed 2 months ago

xzhou82 commented 3 months ago

http://localhost:3000/?genome=hg38&gene=ENST00000407796&mds3=GDC&filterObj={%22type%22:%22tvslst%22,%22in%22:true,%22join%22:%22%22,%22lst%22:[{%22type%22:%22tvs%22,%22tvs%22:{%22term%22:{%22id%22:%22case.demographic.gender%22},%22values%22:[{%22key%22:%22female%22}],%22isnot%22:true}}]}

gdc cannot filter by gene expression

need by 6/27

xzhou82 commented 3 months ago

possibly via usecase and consider ds specific setting