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stjudecloud / workflows

Bioinformatics workflows developed for and used on the St. Jude Cloud project.
MIT License
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docs(README): add a bootstrap guide #141

Closed a-frantz closed 5 months ago

a-frantz commented 5 months ago

This is obviously a pretty minimal guide. I'm open to suggestions and feedback if we want to add more here.

Is there any "need-to-know" information that isn't in the README today?

adthrasher commented 5 months ago

Are there any decent introductions to WDL that you're aware of? The miniwdl repo links to a WDL course and a miniwdl course, but they're not exactly short and I haven't watched them. The cromwell repo has a "5 minute intro to Cromwell", but I'd rather avoid linking to their repo.

a-frantz commented 5 months ago

The cromwell repo has a "5 minute intro to Cromwell", but I'd rather avoid linking to their repo.

Agree with this sentiment.

I just skimmed this article on Terra: https://support.terra.bio/hc/en-us/articles/360037117492-Overview-Getting-started-with-WDL I thought it looked good! It's the same content as open-wdl (https://github.com/openwdl/learn-wdl) but a bit more fleshed out.