When running qc_report with multiple input bam files or in a loop with single bam inputs, we sporadically get a sqlite3.OperationalError: cannot start a transaction within a transaction error. As a temporary fix, try running with a single input bam file, not in a loop. We are working on a permanent fix.
When running qc_report with multiple input bam files or in a loop with single bam inputs, we sporadically get a
sqlite3.OperationalError: cannot start a transaction within a transactionerror. As a temporary fix, try running with a single input bam file, not in a loop. We are working on a permanent fix.