Open JuanWang814 opened 6 months ago
Not sure if the code has changed, but all your three examples work fine for me:
data <- structure(
list(
ID = c(1482L, 1482L, 1482L, 1483L, 1483L, 1483L, 1516L, 1516L, 1516L, 1532L, 1532L, 1532L, 1545L, 1545L, 1545L),
status = c("D", "D", "D", "D", "D", "D", "B", "B", "B", "B", "B", "B", "B", "B", "B"),
x = c(0.107674842, 0.096711338, 0.104180187, 0.17978836, 0.144056182, 0.12804244, 0.240996261, 0.238791261, 0.274007305, 0.750598233, 0.757686569, 0.704884029, 0.468086496, 0.411304874, 0.348525367),
`x:y` = c(0.107674842, 0.096711338, 0.104180187, 0.17978836, 0.144056182, 0.12804244, 0.240996261, 0.238791261, 0.274007305, 0.750598233, 0.757686569, 0.704884029, 0.468086496, 0.411304874, 0.348525367)
),
class = "data.frame",
row.names = c(NA, -15L)
)
model_1 <- lme4::lmer(x ~ status + (1 | ID), data = data)
model_2 <- lme4::lmer(`x:y` ~ status + (1 | ID), data = data)
model_3 <- lm(`x:y` ~ status, data = data)
plot(ggeffects::ggpredict(model = model_1, terms = "status"))
plot(ggeffects::ggpredict(model = model_2, terms = "status"))
plot(ggeffects::ggpredict(model = model_3, terms = "status"))
Created on 2024-02-29 with reprex v2.1.0
Can you please update ggeffects (and possibly other packages, in particular insight) and try again?
Here is a sample dataset:
Note the variables x and x:y (quoted) had the same values in this dataset for illustration purpose.
Use
ggpredict()
for three models:Prediction of
model_1
can be correctly plotted, but when we change the response variable inmodel_1
to the quoted response variable inmodel_2
,ggpredict()
cannot calculate confidence intervals anymore. However, this issue seems to be only associated with mixed models, as usingggpredict()
with the simple linear model (model_3
) had no issue.Also,
effects::effect()
can take the quoted response variable in mixed models without an issue.