The variable name in the output table was "HDI(100%)" but I think it should display as "HDI(99.5%)". I assume this is an issue with the conversion of prob from numeric to string.
library(sjstats)
library(brms)
## example from brms documentation
prior <- c(set_prior("normal(0,2)", class = "b"),
set_prior("student_t(10,0,1)", class = "sigma"),
set_prior("student_t(10,0,1)", class = "sd"))
## fit a linear mixed effects models
fit <- brm(time ~ age + sex + disease + (1 + age|patient),
data = kidney, family = lognormal(),
prior = prior, sample_prior = TRUE,
control = list(adapt_delta = 0.95))
## offending call
tidy_stan(fit, prob = 0.995)
#> # Summary Statistics of Stan-Model
#>
#> estimate std.error HDI(100%) ratio rhat mcse
#> Intercept 3.38 0.56 [ 1.78 5.06] 1.00 1 0.01
#> age -0.01 0.01 [-0.04 0.03] 0.59 1 0.00
#> sexfemale 1.09 0.38 [ 0.01 2.20] 0.96 1 0.01
#> diseaseGN -0.26 0.45 [-1.54 1.06] 0.65 1 0.01
#> diseaseAN -0.28 0.46 [-1.52 1.01] 0.56 1 0.01
#> diseasePKD 0.41 0.63 [-1.21 2.28] 0.63 1 0.01
#> sigma 1.24 0.12 [ 0.94 1.62] 0.79 1 0.00
The variable name in the output table was "HDI(100%)" but I think it should display as "HDI(99.5%)". I assume this is an issue with the conversion of
prob
from numeric to string.