stuart-lab / signac

R toolkit for the analysis of single-cell chromatin data
https://stuartlab.org/signac/
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Unable to download pbmc_multimodal.h5seurat object #1720

Closed Urja25 closed 3 weeks ago

Urja25 commented 3 weeks ago

Hi,

It seems like the link for downloading the pbmc_multimodal.h5seurat object does not work: (https://atlas.fredhutch.org/data/nygc/multimodal/pbmc_multimodal.h5seurat)

`-bash-4.2$ wget --no-check-certificate "https://atlas.fredhutch.org/data/nygc/multimodal/pbmc_multimodal.h5seurat" -O pbmc_multimodal.h5seurat --2024-06-12 16:23:55-- https://atlas.fredhutch.org/data/nygc/multimodal/pbmc_multimodal.h5seurat Resolving www-int.dkfz-heidelberg.de (www-int.dkfz-heidelberg.de)... 193.174.53.28 Connecting to www-int.dkfz-heidelberg.de (www-int.dkfz-heidelberg.de)|193.174.53.28|:80... connected. Proxy request sent, awaiting response... 403 Forbidden 2024-06-12 16:23:55 ERROR 403: Forbidden.

download.file("https://atlas.fredhutch.org/data/nygc/multimodal/pbmc_multimodal.h5seurat", destfile = "pbmc_multimodal.h5seurat") trying URL 'https://atlas.fredhutch.org/data/nygc/multimodal/pbmc_multimodal.h5seurat' Error in download.file("https://atlas.fredhutch.org/data/nygc/multimodal/pbmc_multimodal.h5seurat", : cannot open URL 'https://atlas.fredhutch.org/data/nygc/multimodal/pbmc_multimodal.h5seurat' In addition: Warning messages: 1: In download.file("https://atlas.fredhutch.org/data/nygc/multimodal/pbmc_multimodal.h5seurat", : downloaded length 0 != reported length 919 2: In download.file("https://atlas.fredhutch.org/data/nygc/multimodal/pbmc_multimodal.h5seurat", : cannot open URL 'https://atlas.fredhutch.org/data/nygc/multimodal/pbmc_multimodal.h5seurat': HTTP status was '403 Forbidden' `

At first I thought it was because of firewall restrictions imposed by my institute, however, I cannot seem to download the file locally either.

Is this file available at another, accessible location?

Thanks and best, Urja