stuart-lab / signac

R toolkit for the analysis of single-cell chromatin data
https://stuartlab.org/signac/
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convert signac object to archR #1733

Closed Byronxy closed 3 months ago

Byronxy commented 3 months ago

Dear signac developers, Thanks for developing such a good tool. I'm currently using signac to do the preprocessing analysis of my scATAC-seq data and I hope to also use some tools in archR for downstream analysis. Is it possible for a qucik conversion between these two objects. I found others have developed a tool convert archR to signac (https://github.com/swaruplabUCI/ArchRtoSignac). I'm wondering if there is a tool that can convert signac to archR. Thanks

timoast commented 3 months ago

Please see https://github.com/stuart-lab/signac/issues/633