stuppie / WikiDataScape

A WikiData explorer for Cytoscape
6 stars 1 forks source link

ConcurrentModificationException #3

Closed stuppie closed 8 years ago

stuppie commented 8 years ago

launched empty and add entrez gene 1107

currValues: [NM_001005271] Exception in thread "AWT-EventQueue-0" java.util.ConcurrentModificationException at java.util.ArrayList$Itr.checkForComodification(ArrayList.java:901) at java.util.ArrayList$Itr.next(ArrayList.java:851) at org.cytoscape.model.internal.AbstractTableFacade.getFacadeColumns(AbstractTableFacade.java:136) at org.cytoscape.model.internal.AbstractTableFacade.getColumns(AbstractTableFacade.java:131) at org.cytoscape.browser.internal.view.BrowserTableModel.getRowCount(BrowserTableModel.java:130) at javax.swing.JTable$ModelChange.(JTable.java:4086) at javax.swing.JTable.sortedTableChanged(JTable.java:4104) at javax.swing.JTable.tableChanged(JTable.java:4395) at javax.swing.table.AbstractTableModel.fireTableChanged(AbstractTableModel.java:296) at org.cytoscape.browser.internal.view.BrowserTableModel.fireTableChanged(BrowserTableModel.java:268) at javax.swing.table.AbstractTableModel.fireTableDataChanged(AbstractTableModel.java:198) at org.cytoscape.browser.internal.view.BrowserTableModel.fireTableDataChanged(BrowserTableModel.java:254) at org.cytoscape.browser.internal.view.BrowserTableModel$2.run(BrowserTableModel.java:259) at java.awt.event.InvocationEvent.dispatch(InvocationEvent.java:311) at java.awt.EventQueue.dispatchEventImpl(EventQueue.java:756) at java.awt.EventQueue.access$500(EventQueue.java:97) at java.awt.EventQueue$3.run(EventQueue.java:709) at java.awt.EventQueue$3.run(EventQueue.java:703) at java.security.AccessController.doPrivileged(Native Method) at java.security.ProtectionDomain$1.doIntersectionPrivilege(ProtectionDomain.java:75) at java.awt.EventQueue.dispatchEvent(EventQueue.java:726) at java.awt.EventDispatchThread.pumpOneEventForFilters(EventDispatchThread.java:201) at java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:116) at java.awt.EventDispatchThread.pumpEventsForHierarchy(EventDispatchThread.java:105) at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:101) at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:93) at java.awt.EventDispatchThread.run(EventDispatchThread.java:82) currValues: [7816078] currValues: [ENST00000330494] nodeProps: {Node suid: 64=[<name: 'subclass of', id: 'P279>, <name: 'encodes', id: 'P688>, <name: 'ortholog', id: 'P684>, <name: 'strand orientation', id: 'P2548>, <name: 'found in taxon', id: 'P703>, <name: 'chromosome', id: 'P1057>]}

stuppie commented 8 years ago

Can't replicate... Probably coming from NodeLookupTask::updateNodeTable