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sunduanchen / Scissor

Scissor package
GNU General Public License v3.0
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log2TPM or TPM? #32

Closed liumoLM closed 2 years ago

liumoLM commented 2 years ago

Hi,

Thank you for developing this great tool.

Do you recommend log2TPM or TPM for bulk RNA seq data? I think this results in different phenotype association.

Thanks!

sunduanchen commented 2 years ago

Hi,

Based on our results, I think you can use TPM for bulk RNA-seq data.

Best, Duanchen

liumoLM commented 2 years ago

Great. Thanks for your reply.

All the best, Mo