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suny-downstate-medical-center
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netpyne
A Python package to facilitate the development, parallel simulation, optimization and analysis of multiscale biological neuronal networks in NEURON.
http://www.netpyne.org
MIT License
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Remove saveFileStep
#825
yubelyrn
opened
4 days ago
0
Add examples of recording from synaptic currents mechanisms in the documentation
#824
yubelyrn
opened
2 weeks ago
0
OS.mkdir to OS.makedirs and OSError handeling
#823
Jsprouse0
closed
1 month ago
1
Batch update
#822
jchen6727
closed
1 month ago
0
quick fix, adding cfg.progressBar logic, fixed another issue with the loading bar.
#821
jchen6727
closed
1 month ago
0
Broken links on netpyne site
#820
pgleeson
opened
1 month ago
0
updating documentation (user_documentation.rst) re: new `batchtools` (beta version)
#819
jchen6727
closed
1 month ago
0
Batch
#818
jchen6727
closed
1 month ago
0
fixed bug in conn, updated test/examples/* to use dynamic pathing
#817
jchen6727
closed
1 month ago
0
Conceal 'private' methods from documentation
#816
salvadord
opened
2 months ago
0
dropped python 2 support
#815
vvbragin
closed
2 months ago
0
define `cellInds` before reference in `syncLines` logic
#814
jchen6727
closed
2 months ago
1
Pandas deprecated parameter fix + Loading Bar
#813
RomanB22
closed
2 months ago
0
fix(py312): remove `imp`
#812
sanjayankur31
closed
2 months ago
0
add default padding (==1) for plotCSD, to avoid top/bottom edge artifacts in color plots
#811
samnemo
closed
2 months ago
0
WIP: NeuroML import and export fixes and enhancements
#810
sanjayankur31
opened
4 months ago
2
ci: update setup-python action
#809
sanjayankur31
closed
2 months ago
0
[documentation] Add some information on running netpyne with MPI
#808
sanjayankur31
opened
4 months ago
0
Merge latest development to neuroml branch
#807
pgleeson
closed
4 months ago
0
PR from development to master - VERSION 1.0.6
#806
vvbragin
closed
4 months ago
0
Create a "netpyne" command to run models using the new format i.e. > netpyne index.npjson
#805
salvadord
opened
5 months ago
1
File copying in batch.py compability issue fixed
#804
Podde1
closed
4 months ago
1
API for loading .mod files selectively
#803
vvbragin
closed
4 months ago
0
Correct dimension for basket cell & OLM in CA3 example?
#802
pgleeson
closed
2 months ago
4
Merge latest development to nml branch
#801
pgleeson
closed
6 months ago
0
create() output parameter order mismatch
#800
kedoxey
closed
4 months ago
1
[other] netpyne.org: "Read the docs" link in the middle returns to page -> linked back to netpyne.org
#799
sanjayankur31
closed
3 months ago
2
Netpyne-172 Add metadata for complex stimulation in population
#798
aranega
closed
6 months ago
0
NetPyNe with Optuna batch - mpiexec not starting nrniv [Bug report]
#797
samnemo
opened
7 months ago
2
Handle mod files load through netpyne api method
#796
ddelpiano
closed
4 months ago
2
quick fix, setCfgMapping getattr check to hasattr
#795
jchen6727
closed
8 months ago
0
minor bugfixes
#794
jchen6727
closed
4 months ago
1
Batch experiment reacts strangely when 0 is used for population number of cell
#793
aranega
closed
7 months ago
4
'CompartCell' object has no attribute 'hPointp'
#792
fun0515
opened
8 months ago
1
updates to batch_rev to fix test_cases
#791
jchen6727
closed
8 months ago
0
Fix/786 development -> neuroml branch
#790
pgleeson
closed
8 months ago
0
Feat/test on more pythons
#789
sanjayankur31
closed
4 months ago
1
fix(imports): only import matplotlib where needed and if gui is enabled
#788
sanjayankur31
closed
8 months ago
3
fix(imports): only import matplotlib where needed and if gui is enabled
#787
sanjayankur31
closed
8 months ago
1
[bug] Not all netpyne submodules respect the `netpyne.__gui__` variable, making netpyne currently unusable on hpcs
#786
sanjayankur31
closed
8 months ago
3
fixed loading netParams in some scenarios
#785
vvbragin
closed
8 months ago
0
update batch revision
#784
jchen6727
closed
8 months ago
0
Unable to load simulation output .pkl file
#783
smcelroy97
closed
2 months ago
2
[other] load_file return value is not considered
#782
aranega
closed
4 months ago
1
Update cell input functions in netpyne/cell/inputs.py and user reference
#781
jchen6727
closed
8 months ago
3
docstring for Batch, update grid and util to optimize SGE
#780
jchen6727
closed
8 months ago
1
Check conditions
#779
vvbragin
closed
9 months ago
0
Fixed loading point cell params from legacy models (incl. ssue 607)
#778
vvbragin
closed
9 months ago
0
PR from development to master - VERSION 1.0.5
#777
vvbragin
closed
9 months ago
0
Latets development to neuroml branch
#776
pgleeson
closed
9 months ago
0
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