search

suny-downstate-medical-center / netpyne

A Python package to facilitate the development, parallel simulation, optimization and analysis of multiscale biological neuronal networks in NEURON.
http://www.netpyne.org
MIT License
144 stars 135 forks source link

Save data to Neuroscience Simulation Data Format (NSDF) (uses hdf5) #417

Open salvadord opened 5 years ago

salvadord commented 5 years ago

Link to example saving voltage and current traces: https://github.com/nsdf/nsdf/blob/master/examples/neuron_Hay/test_neuron_Hay.py#L354

Link to example saving spike times: https://github.com/nsdf/nsdf/blob/master/examples/traub2005.py#L209

salvadord commented 5 years ago

@jjcarre I created the nsdf branch for this - https://github.com/Neurosim-lab/netpyne/tree/nsdf

salvadord commented 2 years ago

check NWB format - check if anything related to HDF5