fixed bug in clearAll() + update documentation

suny-downstate-medical-center / netpyne

A Python package to facilitate the development, parallel simulation, optimization and analysis of multiscale biological neuronal networks in NEURON.

http://www.netpyne.org

MIT License

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fixed bug in clearAll() + update documentation #681

Closed urdapile closed 2 years ago

urdapile commented 2 years ago

Fixed bug in clearAll(): When called after "sim.create()", some elements are missing in the sim.net object (elements defined in gatherData, called from "sim.simulate()"). Figure for the NetPyNE struct. Pops are part of a dictionary. Here, exemplified by keys from tutorial 2. *Update a missed field in RxD description: "constants".