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superphy / spfy

Spfy: an integrated graph database for real-time prediction of Escherichia coli phenotypes and downstream comparative analyses
https://lfz.corefacility.ca/superphy/grouch/
Apache License 2.0
4 stars 2 forks source link

create a service to run blazegraph on corefacility #180

Closed kevinkle closed 6 years ago

kevinkle commented 7 years ago

as required by https://github.com/superphy/backend/issues/159 currently running on screen in /Warehouse/Users/claing/superphy/spfy/docker-blazegraph/2.1.4-inferencing using command java -server -Xmx4g -Dbigdata.propertyFile=/Warehouse/Users/claing/superphy/spfy/docker-blazegraph/2.1.4-inferencing/RWStore.properties -jar blazegraph.jar

kevinkle commented 6 years ago

I'll likely setup jetty on the corefacility VM to run blazegraph. We are in an odd deployment atm., to get around permission issues required to write on /Warehouse, so hoping this might help with https://github.com/superphy/backend/issues/187

kevinkle commented 6 years ago

Jetty has been setup using claing as the user to address permission issues. Seems to be working, see https://github.com/superphy/backend/issues/187#issuecomment-346887375 . Closing issue.