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superphy / spfy

Spfy: an integrated graph database for real-time prediction of Escherichia coli phenotypes and downstream comparative analyses
https://lfz.corefacility.ca/superphy/grouch/
Apache License 2.0
4 stars 2 forks source link

deployment of v5.0.0 #234

Closed kevinkle closed 6 years ago

kevinkle commented 6 years ago

we're merged up at this pt https://github.com/superphy/backend/commit/694582f37e1976e5ba8ca5a11e1d93153ac045a4

But getting a 400 Bad Request from the webserver on file uploads. debugging...

kevinkle commented 6 years ago

looks like the new custom_stream_factory() isn't working so webserver breaks when trying to save

kevinkle commented 6 years ago

https://github.com/superphy/backend/commit/d9a127ea89080810307b70e3c419d471e2d8fd05 fixed https://github.com/superphy/backend/issues/234#issuecomment-340198237

kevinkle commented 6 years ago

I'm fixing the legacy website into master and merging with the production branch. Expect to be done today, and will begin writing a script to chunk all the genomes for corefacility run.

kevinkle commented 6 years ago

We're just going to wipe the old site https://github.com/superphy/backend/issues/239

Script to chunk genome processing will be kept on issue https://github.com/superphy/backend/issues/240

kevinkle commented 6 years ago

Also, v5 is deployed.