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superphy / spfy

Spfy: an integrated graph database for real-time prediction of Escherichia coli phenotypes and downstream comparative analyses
https://lfz.corefacility.ca/superphy/grouch/
Apache License 2.0
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blazegraph posts hitting timeouts at corefacility #243

Closed kevinkle closed 7 years ago

kevinkle commented 7 years ago

This is in addition to https://github.com/superphy/backend/issues/187 where blazegraph was only struggling with GET requests. We're seeing timeouts with POSTS on the first chunk of https://github.com/superphy/backend/issues/240 files.

I'm thinking we'll have to create a separate task for any and all interactions with blazegraph (instead of only isolating GETs, POSTs will have to be separate tasks and put on the same single worker queue).

kevinkle commented 7 years ago

https://sentry.io/share/issue/f8f37d02752c48b985373b5b844c8242/ https://sentry.io/share/issue/02542ee7066f451cba0d2baf726c1d50/ https://sentry.io/share/issue/608332d73e694df9a46dc2ae2c7c0ec8/

kevinkle commented 7 years ago

POSTs are now joined into a queue in https://github.com/superphy/backend/issues/247 There are some changes that jointly address POSTs and GETs but these will be discussed in https://github.com/superphy/backend/issues/187