pessto pipeline M1 mac - test pesstofastspec crashing

When running the pipeline in the pessto conda environment on the test data provided I get the following error which produces a crash of python3.

PESSTOFASTSPEC -i EFOSC.2012-04-12T00\:21\:13.429.fits

image name = EFOSC.2012-04-12T00:21:13.429.fits

EFOSC.2012-04-12T00:21:13.429.fits -> tLSQ12btn_20120411_Gr13_Free_slit1.0_1.fits cp: ./arc_20120825_Gr13_Free_slit1.0_56442_1.fits and arc_20120825_Gr13_Free_slit1.0_56442_1.fits are identical (not copied).

check in wavelengh performed ...... spectrum shifted of 14.4 Angstrom

EXTRACTION USING IRAF TASK APALL

Find apertures for tLSQ12btn_20120411_Gr13_Free_slit1.0_1? ('yes'): Resize apertures for tLSQ12btn_20120411_Gr13_Free_slit1.0_1? ('yes'): Edit apertures for tLSQ12btn_20120411_Gr13_Free_slit1.0_1? ('yes'): 2022-02-09 21:36:35.468 python3[98383:1693822] -[NSApplication macOSVersion]: unrecognized selector sent to instance 0x7f8d891b1b10 2022-02-09 21:36:35.478 python3[98383:1693822] Terminating app due to uncaught exception 'NSInvalidArgumentException', reason: '-[NSApplication macOSVersion]: unrecognized selector sent to instance 0x7f8d891b1b10' First throw call stack: ( 0 CoreFoundation 0x00007ff8067076cb exceptionPreprocess + 242 1 libobjc.A.dylib 0x00007ff806469dce objc_exception_throw + 48 2 CoreFoundation 0x00007ff80678c18e -[NSObject(NSObject) retain_OA] + 0 3 CoreFoundation 0x00007ff80666f30e forwarding + 1406 4 CoreFoundation 0x00007ff80666ed08 _CF_forwarding_prep_0 + 120 5 libtk8.6.dylib 0x000000012d90464a GetRGBA + 282 6 libtk8.6.dylib 0x000000012d90445a TkpGetColor + 490 7 libtk8.6.dylib 0x000000012d83e519 Tk_GetColor + 153 8 libtk8.6.dylib 0x000000012d82dff6 Tk_Get3DBorder + 134 9 libtk8.6.dylib 0x000000012d82de5f Tk_Alloc3DBorderFromObj + 127 10 libtk8.6.dylib 0x000000012d83fa55 DoObjConfig + 997 11 libtk8.6.dylib 0x000000012d83f555 Tk_InitOptions + 357 12 libtk8.6.dylib 0x000000012d83f435 Tk_InitOptions + 69 13 libtk8.6.dylib 0x000000012d87082c CreateFrame + 1548 14 libtk8.6.dylib 0x000000012d870b07 TkListCreateFrame + 151 15 libtk8.6.dylib 0x000000012d868528 Initialize + 2168 16 _tkinter.cpython-37m-darwin.so 0x000000011218eb6d Tkapp_New + 861 17 _tkinter.cpython-37m-darwin.so 0x000000011218e703 _tkinter_create + 387 18 python3.7 0x00000001029f5fc6 _PyMethodDef_RawFastCallKeywords + 646 19 python3.7 0x00000001029f60aa _PyCFunction_FastCallKeywords + 42 20 python3.7 0x0000000102afe4fc call_function + 620 21 python3.7 0x0000000102afa522 _PyEval_EvalFrameDefault + 30194 22 python3.7 0x0000000102af2915 _PyEval_EvalCodeWithName + 3269 23 python3.7 0x00000001029f4f71 _PyFunction_FastCallDict + 945 24 python3.7 0x0000000102a5db1c slot_tp_init + 444 25 python3.7 0x0000000102a67537 type_call + 295 26 python3.7 0x00000001029f5bbb _PyObject_FastCallKeywords + 683 27 python3.7 0x0000000102afe565 call_function + 725 28 python3.7 0x0000000102afa522 _PyEval_EvalFrameDefault + 30194 29 python3.7 0x00000001029f57b9 function_code_fastcall + 233 30 python3.7 0x0000000102afe56f call_function + 735 31 python3.7 0x0000000102afa522 _PyEval_EvalFrameDefault + 30194 32 python3.7 0x0000000102af2915 _PyEval_EvalCodeWithName + 3269 33 python3.7 0x0000000102aee210 builtin_exec + 768 34 python3.7 0x00000001029f51ea _PyMethodDef_RawFastCallDict + 586 35 python3.7 0x00000001029f6406 PyCFunction_Call + 166 36 python3.7 0x0000000102afa8fb _PyEval_EvalFrameDefault + 31179 37 python3.7 0x0000000102af2915 _PyEval_EvalCodeWithName + 3269 38 python3.7 0x00000001029f5d23 _PyFunction_FastCallKeywords + 227 39 python3.7 0x0000000102afe56f call_function + 735 40 python3.7 0x0000000102afa522 _PyEval_EvalFrameDefault + 30194 41 python3.7 0x00000001029f57b9 function_code_fastcall + 233 42 python3.7 0x0000000102afe56f call_function + 735 43 python3.7 0x0000000102afa508 _PyEval_EvalFrameDefault + 30168 44 python3.7 0x00000001029f57b9 function_code_fastcall + 233 45 python3.7 0x0000000102afe56f call_function + 735 46 python3.7 0x0000000102afa5b2 _PyEval_EvalFrameDefault + 30338 47 python3.7 0x00000001029f57b9 function_code_fastcall + 233 48 python3.7 0x0000000102afe56f call_function + 735 49 python3.7 0x0000000102afa5b2 _PyEval_EvalFrameDefault + 30338 50 python3.7 0x00000001029f57b9 function_code_fastcall + 233 51 python3.7 0x00000001029f77df object_vacall + 607 52 python3.7 0x00000001029f78dd _PyObject_CallMethodIdObjArgs + 173 53 python3.7 0x0000000102b1f5b6 PyImport_ImportModuleLevelObject + 2054 54 python3.7 0x0000000102aecfb3 builtin_import__ + 147 55 python3.7 0x00000001029f64c4 PyCFunction_Call + 356 56 python3.7 0x0000000102afa8fb _PyEval_EvalFrameDefault + 31179 57 python3.7 0x0000000102af2915 _PyEval_EvalCodeWithName + 3269 58 python3.7 0x00000001029f5d23 _PyFunction_FastCallKeywords + 227 59 python3.7 0x0000000102afe56f call_function + 735 60 python3.7 0x0000000102afa5b2 _PyEval_EvalFrameDefault + 30338 61 python3.7 0x0000000102af2915 _PyEval_EvalCodeWithName + 3269 62 python3.7 0x00000001029f4f71 _PyFunction_FastCallDict + 945 63 python3.7 0x00000001029f77df object_vacall + 607 64 python3.7 0x00000001029f78dd _PyObject_CallMethodIdObjArgs + 173 65 python3.7 0x0000000102b1fb64 PyImportImportModuleLevelObject + 3508 66 python3.7 0x0000000102aecfb3 builtinimport + 147 67 python3.7 0x00000001029f5fff _PyMethodDef_RawFastCallKeywords + 703 68 python3.7 0x00000001029f60aa _PyCFunction_FastCallKeywords + 42 69 python3.7 0x0000000102afe4fc call_function + 620 70 python3.7 0x0000000102afa5b2 _PyEval_EvalFrameDefault + 30338 71 python3.7 0x0000000102af2915 _PyEval_EvalCodeWithName + 3269 72 python3.7 0x00000001029f4f71 _PyFunction_FastCallDict + 945 73 python3.7 0x0000000102af86c1 _PyEval_EvalFrameDefault + 22417 74 python3.7 0x0000000102af2915 _PyEval_EvalCodeWithName + 3269 75 python3.7 0x0000000102aee210 builtin_exec + 768 76 python3.7 0x00000001029f51ea _PyMethodDef_RawFastCallDict + 586 77 python3.7 0x00000001029f6406 PyCFunction_Call + 166 78 python3.7 0x0000000102afa8fb _PyEval_EvalFrameDefault + 31179 79 python3.7 0x0000000102af2915 _PyEval_EvalCodeWithName + 3269 80 python3.7 0x00000001029f5d23 _PyFunction_FastCallKeywords + 227 81 python3.7 0x0000000102afe56f call_function + 735 82 python3.7 0x0000000102afa522 _PyEval_EvalFrameDefault + 30194 83 python3.7 0x00000001029f57b9 function_code_fastcall + 233 84 python3.7 0x0000000102afe56f call_function + 735 85 python3.7 0x0000000102afa508 _PyEval_EvalFrameDefault + 30168 86 python3.7 0x00000001029f57b9 function_code_fastcall + 233 87 python3.7 0x0000000102afe56f call_function + 735 88 python3.7 0x0000000102afa5b2 _PyEval_EvalFrameDefault + 30338 89 python3.7 0x00000001029f57b9 function_code_fastcall + 233 90 python3.7 0x0000000102afe56f call_function + 735 91 python3.7 0x0000000102afa5b2 _PyEval_EvalFrameDefault + 30338 92 python3.7 0x00000001029f57b9 function_code_fastcall + 233 93 python3.7 0x00000001029f77df object_vacall + 607 94 python3.7 0x00000001029f78dd _PyObject_CallMethodIdObjArgs + 173 95 python3.7 0x0000000102b1f5b6 PyImportImportModuleLevelObject + 2054 96 python3.7 0x0000000102aecfb3 builtinimport + 147 97 python3.7 0x00000001029f64c4 PyCFunction_Call + 356 98 python3.7 0x0000000102afa8fb _PyEval_EvalFrameDefault + 31179 99 python3.7 0x0000000102af2915 _PyEval_EvalCodeWithName + 3269 100 python3.7 0x00000001029f5d23 _PyFunction_FastCallKeywords + 227 101 python3.7 0x0000000102afe56f call_function + 735 102 python3.7 0x0000000102afa5b2 _PyEval_EvalFrameDefault + 30338 103 python3.7 0x0000000102af2915 _PyEval_EvalCodeWithName + 3269 104 python3.7 0x00000001029f4f71 _PyFunction_FastCallDict + 945 105 python3.7 0x00000001029f77df object_vacall + 607 106 python3.7 0x00000001029f78dd _PyObject_CallMethodIdObjArgs + 173 107 python3.7 0x0000000102b1fb64 PyImport_ImportModuleLevelObject + 3508 108 python3.7 0x0000000102aecfb3 builtin_import + 147 109 python3.7 0x00000001029f5fff _PyMethodDef_RawFastCallKeywords + 703 110 python3.7 0x00000001029f60aa _PyCFunction_FastCallKeywords + 42 111 python3.7 0x0000000102afe4fc call_function + 620 112 python3.7 0x0000000102afa5b2 _PyEval_EvalFrameDefault + 30338 113 python3.7 0x0000000102af2915 _PyEval_EvalCodeWithName + 3269 114 python3.7 0x00000001029f4f71 _PyFunction_FastCallDict + 945 115 python3.7 0x0000000102af86c1 _PyEval_EvalFrameDefault + 22417 116 python3.7 0x00000001029f57b9 function_code_fastcall + 233 117 python3.7 0x0000000102afe56f call_function + 735 118 python3.7 0x0000000102afa5b2 _PyEval_EvalFrameDefault + 30338 119 python3.7 0x0000000102af2915 _PyEval_EvalCodeWithName + 3269 120 python3.7 0x0000000102aee210 builtin_exec + 768 121 python3.7 0x00000001029f51ea _PyMethodDef_RawFastCallDict + 586 122 python3.7 0x00000001029f6406 PyCFunction_Call + 166 123 python3.7 0x0000000102afa8fb _PyEval_EvalFrameDefault + 31179 124 python3.7 0x0000000102af2915 _PyEval_EvalCodeWithName + 3269 125 python3.7 0x00000001029f5d23 _PyFunction_FastCallKeywords + 227 126 python3.7 0x0000000102afe56f call_function + 735 127 python3.7 0x0000000102afa522 _PyEval_EvalFrameDefault + 30194 128 python3.7 0x00000001029f57b9 function_code_fastcall + 233 129 python3.7 0x0000000102afe56f call_function + 735 130 python3.7 0x0000000102afa508 _PyEval_EvalFrameDefault + 30168 131 python3.7 0x00000001029f57b9 function_code_fastcall + 233 132 python3.7 0x0000000102afe56f call_function + 735 133 python3.7 0x0000000102afa5b2 _PyEval_EvalFrameDefault + 30338 134 python3.7 0x00000001029f57b9 function_code_fastcall + 233 135 python3.7 0x0000000102afe56f call_function + 735 136 python3.7 0x0000000102afa5b2 _PyEval_EvalFrameDefault + 30338 137 python3.7 0x00000001029f57b9 function_code_fastcall + 233 138 python3.7 0x00000001029f77df object_vacall + 607 139 python3.7 0x00000001029f78dd _PyObject_CallMethodIdObjArgs + 173 140 python3.7 0x0000000102b1f5b6 PyImportImportModuleLevelObject + 2054 141 python3.7 0x0000000102aecfb3 builtinimport__ + 147 142 python3.7 0x00000001029f64c4 PyCFunction_Call + 356 143 python3.7 0x0000000102afa8fb _PyEval_EvalFrameDefault + 31179 144 python3.7 0x0000000102af2915 _PyEval_EvalCodeWithName + 3269 145 python3.7 0x00000001029f5d23 _PyFunction_FastCallKeywords + 227 146 python3.7 0x0000000102afe56f call_function + 735 147 python3.7 0x0000000102afa5b2 _PyEval_EvalFrameDefault + 30338 148 python3.7 0x0000000102af2915 _PyEval_EvalCodeWithName + 3269 149 python3.7 0x00000001029f4f71 _PyFunction_FastCallDict + 945 150 python3.7 0x00000001029f77df object_vacall + 607 151 python3.7 0x00000001029f78dd _PyObject_CallMethodIdObjArgs + 173 152 python3.7 0x0000000102b1fb64 PyImport_ImportModuleLevelObject + 3508 153 python3.7 0x0000000102aecfb3 builtin_import + 147 154 python3.7 0x00000001029f5fff _PyMethodDef_RawFastCallKeywords + 703 155 python3.7 0x00000001029f60aa _PyCFunction_FastCallKeywords + 42 156 python3.7 0x0000000102afe4fc call_function + 620 157 python3.7 0x0000000102afa5b2 _PyEval_EvalFrameDefault + 30338 158 python3.7 0x0000000102af2915 _PyEval_EvalCodeWithName + 3269 159 python3.7 0x00000001029f4f71 _PyFunction_FastCallDict + 945 160 python3.7 0x0000000102af86c1 _PyEval_EvalFrameDefault + 22417 161 python3.7 0x0000000102af2915 _PyEval_EvalCodeWithName + 3269 162 python3.7 0x00000001029f5d23 _PyFunction_FastCallKeywords + 227 163 python3.7 0x0000000102afe56f call_function + 735 164 python3.7 0x0000000102afa508 _PyEval_EvalFrameDefault + 30168 165 python3.7 0x00000001029f57b9 function_code_fastcall + 233 166 python3.7 0x0000000102afe56f call_function + 735 167 python3.7 0x0000000102afa5b2 _PyEval_EvalFrameDefault + 30338 168 python3.7 0x00000001029f57b9 function_code_fastcall + 233 169 python3.7 0x0000000102afe56f call_function + 735 170 python3.7 0x0000000102afa5b2 _PyEval_EvalFrameDefault + 30338 171 python3.7 0x00000001029f57b9 function_code_fastcall + 233 172 python3.7 0x0000000102afe56f call_function + 735 173 python3.7 0x0000000102afa508 _PyEval_EvalFrameDefault + 30168 174 python3.7 0x00000001029f57b9 function_code_fastcall + 233 175 python3.7 0x0000000102afe56f call_function + 735 176 python3.7 0x0000000102afa5b2 _PyEval_EvalFrameDefault + 30338 177 python3.7 0x00000001029f57b9 function_code_fastcall + 233 178 python3.7 0x0000000102afe56f call_function + 735 179 python3.7 0x0000000102afa508 _PyEval_EvalFrameDefault + 30168 180 python3.7 0x0000000102af2915 _PyEval_EvalCodeWithName + 3269 181 python3.7 0x00000001029f5d23 _PyFunction_FastCallKeywords + 227 182 python3.7 0x0000000102afe56f call_function + 735 183 python3.7 0x0000000102afa658 _PyEval_EvalFrameDefault + 30504 184 python3.7 0x0000000102af2915 _PyEval_EvalCodeWithName + 3269 185 python3.7 0x00000001029f4f71 _PyFunction_FastCallDict + 945 186 python3.7 0x0000000102afa810 _PyEval_EvalFrameDefault + 30944 187 python3.7 0x00000001029f57b9 function_code_fastcall + 233 188 python3.7 0x0000000102afe56f call_function + 735 189 python3.7 0x0000000102afa522 _PyEval_EvalFrameDefault + 30194 190 python3.7 0x0000000102af2915 _PyEval_EvalCodeWithName + 3269 191 python3.7 0x00000001029f4f71 _PyFunction_FastCallDict + 945 192 python3.7 0x00000001029f83b3 method_call + 195 193 python3.7 0x00000001029f62a1 PyObject_Call + 241 194 python3.7 0x0000000102afa810 _PyEval_EvalFrameDefault + 30944 195 python3.7 0x0000000102af2915 _PyEval_EvalCodeWithName + 3269 196 python3.7 0x00000001029f4f71 _PyFunction_FastCallDict + 945 197 python3.7 0x0000000102a5bcd5 slot_tp_call + 437 198 python3.7 0x00000001029f5bbb _PyObject_FastCallKeywords + 683 199 python3.7 0x0000000102afe565 call_function + 725 200 python3.7 0x0000000102afa658 _PyEval_EvalFrameDefault + 30504 201 python3.7 0x0000000102af2915 _PyEval_EvalCodeWithName + 3269 202 python3.7 0x00000001029f5d23 _PyFunction_FastCallKeywords + 227 203 python3.7 0x0000000102afe56f call_function + 735 204 python3.7 0x0000000102afa522 _PyEval_EvalFrameDefault + 30194 205 python3.7 0x00000001029f57b9 function_code_fastcall + 233 206 python3.7 0x0000000102afe56f call_function + 735 207 python3.7 0x0000000102afa522 _PyEval_EvalFrameDefault + 30194 208 python3.7 0x0000000102af2915 _PyEval_EvalCodeWithName + 3269 209 python3.7 0x0000000102aee210 builtin_exec + 768 210 python3.7 0x00000001029f5fc6 _PyMethodDef_RawFastCallKeywords + 646 211 python3.7 0x00000001029f60aa _PyCFunction_FastCallKeywords + 42 212 python3.7 0x0000000102afe4fc call_function + 620 213 python3.7 0x0000000102afa5b2 _PyEval_EvalFrameDefault + 30338 214 python3.7 0x00000001029f57b9 function_code_fastcall + 233 215 python3.7 0x0000000102afe56f call_function + 735 216 python3.7 0x0000000102afa522 _PyEval_EvalFrameDefault + 30194 217 python3.7 0x00000001029f57b9 function_code_fastcall + 233 218 python3.7 0x0000000102afe56f call_function + 735 219 python3.7 0x0000000102afa522 _PyEval_EvalFrameDefault + 30194 220 python3.7 0x0000000102af2915 _PyEval_EvalCodeWithName + 3269 221 python3.7 0x0000000102b43bd4 PyRun_FileExFlags + 244 222 python3.7 0x0000000102b43185 PyRun_SimpleFileExFlags + 469 223 python3.7 0x0000000102b6e862 pymain_main + 12002 224 python3.7 0x00000001029ce06d main + 125 225 dyld 0x00000002030c34fe start + 462 226 ??? 0x0000000000000003 0x0 + 3 ) libc++abi: terminating with uncaught exception of type NSException

PANIC in `/Users/cosimo/iraf-2.17/noao/bin.macos64/x_apextract.e': Write to IPC with no reader Abort trap: 6

svalenti / pessto