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swanss / FragFold

MIT License
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local FragFold #1

Closed adelakun2 closed 1 month ago

adelakun2 commented 8 months ago

How do one run FragFold locally?

swanss commented 5 months ago

Hi! Sorry for the delay in response.

If you're still interested in this, could you please explain your use case a little more? It would be easy for me to add an option to loop over the colabfold jobs sequentially. Depending on your GPU set-up, you may have access to multiple, in which case it would be better run multiple colabfold jobs in parallel.

Edit: I've added a new branch with support for local execution using nextflow. Let me know if you're interested in trying this.