peak_region_fragments & blacklist_region_fragments

swaruplab / Single-nuclei-epigenomic-and-transcriptomic-landscape-in-Alzheimer-disease

Single-nuclei RNA-seq and ATAC-seq in Alzheimer's disease

https://swaruplab.bio.uci.edu/singlenucleiAD

MIT License

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Open heomanism opened 1 year ago

heomanism commented 1 year ago

Hello

I reproduce your research for my study of snATACseq & snRNAseq.

I downloaded all of your metadata in GEO and Synapse database, but I can't find the file included peak_region_fragments variable.

Do you provide cell-meta data including peak_region_fragments ?

Then, please give me the link for that file.

Thank you.

Biocard commented 1 year ago

@heomanism Hi, how did you download the Synapse database? It seems to require permission.