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swbiggs4 / Kaggle_Nuclei_Counting

Team GitHub page for Kaggle nuclei counting competition
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Sizing and cropping images #5

Open yhr91 opened 6 years ago

yhr91 commented 6 years ago

Feel free to assign yourself to this issue

yhr91 commented 6 years ago

Questions to think about:

tobysiko commented 6 years ago

Something else I have experimented with: based on the distribution of image sizes, define a number of fixed bins, e.g. '256', '512', '1024' and assign every image to the best-fitting bin and pad with zeros. Downside: you have to train for each bin separately and it will definitely increase overall memory and compute demands. I have working code for this that I wrote for my protein work - but there image sizes were fairly spread out. Maybe resizing all images to the most common dimension would be best in this case.