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swcarpentry / r-novice-gapminder

R for Reproducible Scientific Analysis
http://swcarpentry.github.io/r-novice-gapminder/
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Update 7 packages #886

Closed carpentries-bot closed 8 months ago

carpentries-bot commented 8 months ago

:robot: This is an automated build

This will update 7 packages in your lesson with the following versions:

# NEW OR REMOVED PACKAGES -------------------------------
- lattice  [required by Matrix]
- mgcv     [required by ggplot2]
- lattice   [0.22-5 -> *]
- mgcv      [1.9-1 -> *]
- nlme      [3.1-164 -> *]

# CRAN -----------------------------------------------------------------------
- ggplot2   [3.4.4 -> 3.5.0]
- igraph    [2.0.1.1 -> 2.0.2]
- renv      [1.0.3 -> 1.0.5]
- xfun      [0.41 -> 0.42]
- lattice   [* -> 0.22-5]
- mgcv      [* -> 1.9-1]

# RSPM -----------------------------------------------------------------------
- nlme      [* -> 3.1-164]

:stopwatch: In a few minutes, a comment will appear that will show you how the output has changed based on these updates.

If you want to inspect these changes locally, you can use the following code to check out a new branch:

git fetch origin update/packages
git checkout update/packages
github-actions[bot] commented 8 months ago

Thank you!

Thank you for your pull request :smiley:

:robot: This automated message can help you check the rendered files in your submission for clarity. If you have any questions, please feel free to open an issue in {sandpaper}.

If you have files that automatically render output (e.g. R Markdown), then you should check for the following:

Rendered Changes

:mag: Inspect the changes: https://github.com/swcarpentry/r-novice-gapminder/compare/md-outputs..md-outputs-PR-886

The following changes were observed in the rendered markdown documents:

 01-rstudio-intro.md                                |   2 +-
 02-project-intro.md                                |   2 +-
 03-seeking-help.md                                 |   2 +-
 fig/08-plot-ggplot2-rendered-ch2-sol-1.png         | Bin 56747 -> 56748 bytes
 fig/08-plot-ggplot2-rendered-ch3-sol-1.png         | Bin 246412 -> 246415 bytes
 fig/08-plot-ggplot2-rendered-ch4b-sol-1.png        | Bin 47787 -> 47774 bytes
 fig/08-plot-ggplot2-rendered-ch5-sol-1.png         | Bin 33135 -> 33145 bytes
 ...-ggplot2-rendered-lifeExp-layer-example-1-1.png | Bin 231649 -> 231661 bytes
 fig/08-plot-ggplot2-rendered-lifeExp-line-1.png    | Bin 38246 -> 38279 bytes
 fig/08-plot-ggplot2-rendered-lifeExp-line-by-1.png | Bin 226561 -> 226568 bytes
 ...-plot-ggplot2-rendered-lifeExp-line-point-1.png | Bin 232175 -> 232180 bytes
 fig/08-plot-ggplot2-rendered-theme-1.png           | Bin 46933 -> 46937 bytes
 md5sum.txt                                         |   2 +-
 results/lifeExp.png                                | Bin 186154 -> 186159 bytes
 14 files changed, 4 insertions(+), 4 deletions(-)
What does this mean? If you have source files that require output and figures to be generated (e.g. R Markdown), then it is important to make sure the generated figures and output are reproducible. This output provides a way for you to inspect the output in a diff-friendly manner so that it's easy to see the changes that occur due to new software versions or randomisation.

:stopwatch: Updated at 2024-03-05 00:18:22 +0000