Cannot run

[pradyumnasagar]

Cannot start TCC-GUI

Steps to reproduce the behavior:

1. install all package as mentioned
2. Run shiny::runApp("TCC-GUI-master//TCC-GUI", launch.browser = TRUE)

Listening on http://127.0.0.1:5541 Warning in readLines(file, warn = FALSE) : invalid input found on input connection 'server-simulation.R' Warning: Error in source: server-simulation.R:108:9: unexpected INCOMPLETE_STRING 107: input$simulationGeneNum, 108: " ^ 50: source 49: server [/home/pradyumna/tools/Prady/TCCGUI/TCC-GUI/TCC-GUI/server.R#58] Error in source(file = "server-simulation.R", local = TRUE, encoding = "UTF-8") : server-simulation.R:108:9: unexpected INCOMPLETE_STRING 107: input$simulationGeneNum, 108: "

• OS: Arch Linux
• Browser chrome
• R Version 3.6.2

[swsoyee]

@pradyumnasagar Thank you for considering to use TCC-GUI in your project! The problem is quite simple, there is a × mark at line 108 in server-simulation.R, if your system doesn't include enough charset, it will cause the launching failed.

The mark is appear in 3 places in this project:

# Command
grep -n × *.R

# Result
server-simulation.R:108:        " × ",
server-simulation.R:110:        " × ",
server-tcc-calculation.R:196:                      " = Library Size × Normalization Factor."

I think just replace those mark and it will be work. Since I don't have the same environment for reproducing this problem, it's very welcome to receive a pull request after you fix that.