swvanderlaan / MetaGWASToolKit

A ToolKit to perform a Meta-analysis of Genome-Wide Association Studies
https://swvanderlaan.github.io/MetaGWASToolKit/
MIT License
15 stars 2 forks source link

Array jobs #24

Closed swvanderlaan closed 2 years ago

swvanderlaan commented 4 years ago

Is your feature request related to a problem? Please describe. Currently the main scripts chunk the files and submit jobs for each individual file. This increases the load on the server, and decreases your fair usage quotum.

Describe the solution you'd like The individual submission scripts should be wrapped in an array job to reduce the load on the server.

Describe alternatives you've considered An alternative would be not to chunk the files, but this would be inefficient and significantly reduce the amount of time needed to run an analysis.

Additional context None.