Problem with user specification of negative values for the degrees of freedom Va (-dfvara)

syntheke / bayesR

Bayesian hierarchical model for complex trait analysis

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Problem with user specification of negative values for the degrees of freedom Va (-dfvara) #21

Closed vincentgarin closed 7 months ago

vincentgarin commented 7 months ago

I tried to manually specified the prior variance of the SNP effect (-dfvara) but I get an error. For positive values it works

Example code

./bayesR -bfile d -out res -dfvara -2.0 (default value) ./bayesR -bfile d -out res -dfvara -3.0

Error message

Missing argument for :-dfvara 5 STOP ERROR: Problem parsing the command line arguments

Thanks in advance for your help.

syntheke commented 7 months ago

Hmm, I can see that this was already fixed several years ago. Somehow it got lost when the previous two code bases were merged into one. Should work now.