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synthetichealth / synthea

Synthetic Patient Population Simulator
https://synthetichealth.github.io/synthea
Apache License 2.0
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Could not load local modules #940

Open guozhuoran918 opened 3 years ago

guozhuoran918 commented 3 years ago

Hi, I tried to use the following commands, ./run_synthea -p 100 --exporter.fhir.export=false --exporter.practitioner.fhir.export=false --exporter.symptoms.csv.export=true --exporter.symptoms.mode=1 --exporter.years_of_history=0 -m symcat_nlice_mel3* -d "/home/gzr/文档/medvice/synthea/src/main/resources/modules/MELNEW" --exporter.baseDirectory="./output/nlicemel" However, it could scan my local modules, but could not load them, Are there any possible reasons causing this problem?

Scanned 61 modules and 121 submodules.
Scanned 3 local modules and 0 local submodules.
Loading submodule modules/NICE/symcat_nice_seasonal_influenza.json
Loading submodule modules/MELEDIT/symcat_mel2_pulmonary_edema_young.json
Loading submodule modules/MELEDIT/symcat_mel2_pulmonary_edema_oldest.json
Loading submodule modules/MELEDIT/symcat_mel2_subarachnoidal_bleeding.json
Loading submodule modules/breast_cancer/tnm_diagnosis.json
Loading submodule modules/MELEDIT/symcat_mel2_covid-19.json
Loading submodule modules/NLICE/symcat_nlice_subarachnoideal_bleeding.json
Loading submodule modules/allergies/allergy_incidence.json
Loading submodule modules/MELEDIT/symcat_mel2_ibs_constipation.json
Loading submodule modules/MELEDIT/symcat_mel2_carpal_tunnel_syndrome.json
Loading submodule modules/MELEDIT/symcat_mel2_migraine.json
Loading submodule modules/covid19/nonsurvivor_lab_values.json
Loading submodule modules/MELEDIT/symcat_mel2_gout.json
Loading submodule modules/NICE/symcat_nice_lumbar_spinal_stenosis.json
Loading submodule modules/covid19/outcomes.json
Loading submodule modules/MELEDIT/symcat_mel2_salmonella_infection.json
Loading submodule modules/MELEDIT/symcat_mel2_pneumococcal_pneumonia.json
Loading submodule modules/MELEDIT/symcat_mel2_cauda_equina.json
Loading submodule modules/covid19/survivor_lab_values.json
Loading submodule modules/covid19/diagnose_blood_clot.json
Loading submodule modules/dermatitis/moderate_cd_obs.json
Loading submodule modules/NLICE/symcat_nlice_acute_pancreatitis.json
Loading submodule modules/dermatitis/severe_cd_obs.json
Loading submodule modules/contraceptives/female_sterilization.json
Loading submodule modules/covid19/medications.json
Loading submodule modules/allergies/outgrow_env_allergies.json
Loading submodule modules/lung_cancer/lung_cancer_probabilities.json
Loading submodule modules/NLICE/symcat_nlice_cauda_equina.json
Loading submodule modules/contraceptives/patch_contraceptive.json
Loading submodule modules/MELEDIT/symcat_mel2_norovirus_gastroenteritis.json
Loading submodule modules/covid19/supplies_hospitalization.json
Loading submodule modules/allergies/allergy_panel.json
Loading submodule modules/breast_cancer/surgery_therapy_breast.json
Loading submodule modules/NLICE/symcat_nlice_tension_type_headache.json
Loading submodule modules/allergies/severe_allergic_reaction.json
Loading submodule modules/covid19/supplies_intubation.json
Loading submodule modules/MELEDIT/symcat_mel2_viral_meningitis_varicella_zoster_virus.json
Loading submodule modules/covid19/infection.json
Loading submodule modules/NLICE/symcat_nlice_covid-19.json
Loading submodule modules/dermatitis/early_severe_eczema_obs.json
Loading submodule modules/total_joint_replacement/functional_status_assessments.json
Loading submodule modules/MELNEW/symcat_mel3_seasonal_influenza.json
Loading submodule modules/MELEDIT/symcat_mel2_functional_constipation.json
Loading submodule modules/MELEDIT/symcat_mel2_rheumatoid_arthritis_masculine.json
Loading submodule modules/NLICE/symcat_nlice_appendicitis.json
Loading submodule modules/MELEDIT/symcat_mel2_pneumothorax.json
Loading submodule modules/NICE/symcat_nice_subarachnoideal_bleeding.json
Loading submodule modules/contraceptives/ring_contraceptive.json
Loading submodule modules/NLICE/symcat_nlice_hernia_nuclei_pulposi.json
Loading submodule modules/NICE/symcat_nice_lumbago.json
Loading submodule modules/NICE/symcat_nice_appendicitis.json
Loading submodule modules/covid19/end_symptoms.json
Loading submodule modules/NLICE/symcat_nlice_lumbar_spinal_stenosis.json
Loading submodule modules/MELEDIT/symcat_mel2_yersinia_enterocolitica_infection.json
Loading submodule modules/covid19/diagnose_bacterial_infection.json
Loading submodule modules/MELEDIT/symcat_mel2_appendicitis.json
Loading submodule modules/anemia/anemia_sub.json
Loading submodule modules/MELEDIT/symcat_mel2_1update_age_time_to_the_end.json
Loading submodule modules/MELEDIT/symcat_mel2_seasonal_Influenza.json
Loading submodule modules/medications/otc_pain_reliever.json
Loading submodule modules/MELEDIT/symcat_mel2_asthma.json
Loading submodule modules/breast_cancer/hormone_diagnosis.json
Loading submodule modules/NLICE/symcat_nlice_lumbago.json
Loading submodule modules/MELEDIT/symcat_mel2_acterial_meningitis.json
Loading submodule modules/covid19/supplies_icu.json
Loading submodule modules/MELNEW/symcat_mel3_1update_age_time_to_the_end.json
Loading submodule modules/medications/strong_opioid_pain_reliever.json
Loading submodule modules/medications/ear_infection_antibiotic.json
Loading submodule modules/NICE/symcat_nice_tension_type_headache.json
Loading submodule modules/allergies/immunotherapy.json
Loading submodule modules/MELEDIT/symcat_mel2_lumbar_spinal_stenosis.json
Loading submodule modules/dermatitis/mid_moderate_eczema_obs.json
Loading submodule modules/contraceptives/clear_contraceptive.json
Loading submodule modules/NICE/symcat_nice_migraine.json
Loading submodule modules/MELEDIT/symcat_mel2_pulmonary_edema_old.json
Loading submodule modules/covid19/end_outcomes.json
Loading submodule modules/surgery/general_anesthesia.json
Loading submodule modules/MELEDIT/symcat_mel2_atrophic_gastritis.json
Loading submodule modules/veterans/veteran_suicide_probabilities.json
Loading submodule modules/contraceptives/oral_contraceptive.json
Loading submodule modules/medications/moderate_opioid_pain_reliever.json
Loading submodule modules/NICE/symcat_nice_acute_pancreatitis.json
Loading submodule modules/covid19/measurements_vitals.json
Loading submodule modules/NICE/symcat_nice_pneumothorax.json
Loading submodule modules/medications/otc_antihistamine.json
Loading submodule modules/covid19/determine_risk.json
Loading Lookup Table: covid-19-severity-outcomes.csv
Loading Lookup Table: covid-19-survival-outcomes.csv
Loading submodule modules/NLICE/symcat_nlice_functional_constipation.json
Loading submodule modules/NICE/symcat_nice_ibs.json
Loading submodule modules/covid19/admission.json
Loading submodule modules/MELEDIT/symcat_mel2_giardiasis.json
Loading submodule modules/MELEDIT/symcat_mel2_acute_pancreatitis.json
Loading submodule modules/covid19/measurements_frequent.json
Loading submodule modules/NLICE/symcat_nlice_seasonal_influenza.json
Loading submodule modules/MELNEW/symcat_mel3_covid-19.json
Loading submodule modules/NLICE/symcat_nlice_pneumothorax.json
Loading submodule modules/NICE/symcat_nice_covid-19.json
Loading submodule modules/dermatitis/mid_severe_eczema_obs.json
Loading submodule modules/MELEDIT/symcat_mel2_tension_type_headache.json
Loading submodule modules/covid19/symptoms.json
Loading submodule modules/MELEDIT/symcat_mel2_osteoarthritis.json
Loading submodule modules/dermatitis/early_moderate_eczema_obs.json
Loading submodule modules/contraceptives/intrauterine_device.json
Loading submodule modules/NLICE/symcat_nlice_migraine.json
Loading submodule modules/contraceptives/male_sterilization.json
Loading submodule modules/NICE/symcat_nice_functional_constipation.json
Loading submodule modules/NICE/symcat_nice_1update_age_time_to_the_end.json
Loading submodule modules/contraceptives/implant_contraceptive.json
Loading submodule modules/breast_cancer/hormonetherapy_breast.json
Loading submodule modules/MELEDIT/symcat_mel2_lumbago.json
Loading submodule modules/covid19/measurements_daily.json
Loading submodule modules/contraceptives/injectable_contraceptive.json
Loading submodule modules/NLICE/symcat_nlice_ibs.json
Loading submodule modules/MELEDIT/symcat_mel2_viral_meningitis_enterovirus.json
Loading submodule modules/covid19/treat_blood_clot.json
Loading submodule modules/MELEDIT/symcat_mel2_pheumatoid_arthritis_feminine.json
Loading submodule modules/allergies/outgrow_food_allergies.json
Loading submodule modules/MELEDIT/symcat_mel2_hernia_nuclei_pulposi.json
Loading submodule modules/breast_cancer/chemotherapy_breast.json
Loading submodule modules/NICE/symcat_nice_hernia_nuclei_pulposi.json
Loading submodule modules/NLICE/symcat_nlice_1update_age_time_to_the_end.json
Loading submodule modules/NICE/symcat_nice_cauda_equina.json
Running with options:
Population: 100
Seed: 1631883488336
Provider Seed:1631883488336
Location: Massachusetts
Min Age: 0
Max Age: 140
Modules:
> [0 loaded]

jawalonoski commented 3 years ago

I would refer you to this wiki page: https://github.com/synthetichealth/synthea/wiki/The--M-Feature

Basically, please do not use the M Feature. We do not support troubleshooting the M Feature. Every day that goes by I am increasingly tempted to remove it from the code.

Run you command without -m it should load your local modules that you specified with the -d parameter.