sys-bio simplesbml issues

sys-bio / simplesbml

Python package for building SBML models without needing to use libSBML.

http://simplesbml.readthedocs.io/en/latest/

MIT License

10 stars 12 forks source link

issues

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Unknown writeCodeFromString()

#31 Airwan opened 1 year ago
1
pip install puts in old version

#30 upibhalla closed 3 years ago
2
Unit warning when using default compartment

#29 kaisengit closed 3 years ago
2
size_units as new argument to addCompartment()

#28 dalbabur opened 4 years ago
0
Add 'sbml' tag

#27 mhucka closed 4 years ago
1
add conditional dependency for python3.7

#26 gglyptodon closed 3 years ago
0
Python 3.7 compatibility ('tesbml' dependency in setup.py)

#25 gglyptodon closed 3 years ago
2
Warnings should not use print()

#24 0u812 closed 3 years ago
0
Problem with adding reactions

#23 kirichoi closed 8 years ago
1
Add a reference to the paper in the readme.md

#22 hsauro closed 3 years ago
0
What happens if typing 'python setup.py install' does work?

#21 hsauro closed 3 years ago
0
Why do users have to "In the command line, move into the 'simplesbml/' folder. "

#20 hsauro closed 3 years ago
0
Explain how users can get hold of libSBML

#19 hsauro closed 3 years ago
0
Add an example to the readme.md file.

#18 hsauro closed 3 years ago
0
Validate sbml before calling toSBML etc

#17 hsauro closed 8 years ago
0
Set volume to 1 L rather than 1E-15

#16 hsauro closed 8 years ago
0
Add ability to set compartment volume

#15 carolc24 closed 8 years ago
0
Add useValuesFromTriggerTime()

#14 carolc24 closed 8 years ago
0
Update documents/readme to include a simple example

#13 kirichoi closed 8 years ago
1
Fix so that $ in reactants/products no longer causes incorrect output

#12 violasox closed 9 years ago
1
Stoichiometry attribute is not included in generated SBML

#11 0u812 closed 9 years ago
0
SBML validation

#10 hsauro closed 9 years ago
0
Flattening SBML

#9 hsauro closed 9 years ago
0
Issue warning message for unsupported sbml features

#8 hsauro closed 3 years ago
0
Add a setLevelAndVersion (n, m)

#7 hsauro closed 9 years ago
0
Add help on how to intall

#6 hsauro closed 8 years ago
0
Move delay argument to end of list

#5 hsauro closed 9 years ago
0
Include stoichiometry in addReaction

#4 hsauro closed 9 years ago
0
Specify concentration in addSpecies

#3 hsauro closed 9 years ago
0
Add toSBML to the method list

#2 hsauro closed 9 years ago
0
Fix the issue of tab completion showing all libsbml modules

#1 kirichoi closed 9 years ago
0