mariapirespacheco
commented
2 years ago Hi, Sounds like the problem is not feasible. Do you have a biomass function and if yes do you use medium constraints? Can you check if the biomass carries a flux with the medium constraint? And if this flux is larger than 1e-4? Best Maria
On Wed, 6 Apr 2022 at 05:21, rupabhowmick19 @.***> wrote:
I am using the example file in FASTCORMICS for microarray data, and I ran into the following error:
Output argument "x" (and possibly others) not assigned a value in the execution with "cplexlp" function.
Error in LP7_fastcormics (line 32) x = cplexlp(f,Aineq,bineq,Aeq,beq,lb,ub);
Error in findSparseMode_4_fastcormics (line 19) V = LP7_fastcormics( J, model, epsilon );
Error in fastcore_4_fastcormics (line 23) Supp = findSparseMode_4_fastcormics( J, P, singleton, model, epsilon,t );
Error in fastcormics (line 142) A = fastcore_4_fastcormics(B, model, epsilon, C);
The initial problem was with finding the cplexlp function which I sorted by setting path for the cplex folder. I am using the exact data provided in the example file and wonder why it would not assign value to the 'x' variable using LP7_fastcormics function. Can you help me here?
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I am using the example file in FASTCORMICS for microarray data, and I ran into the following error:
Output argument "x" (and possibly others) not assigned a value in the execution with "cplexlp" function.
Error in LP7_fastcormics (line 32) x = cplexlp(f,Aineq,bineq,Aeq,beq,lb,ub);
Error in findSparseMode_4_fastcormics (line 19) V = LP7_fastcormics( J, model, epsilon );
Error in fastcore_4_fastcormics (line 23) Supp = findSparseMode_4_fastcormics( J, P, singleton, model, epsilon,t );
Error in fastcormics (line 142) A = fastcore_4_fastcormics(B, model, epsilon, C);
The initial problem was with finding the cplexlp function which I sorted by setting path for the cplex folder. I am using the exact data provided in the example file and wonder why it would not assign value to the 'x' variable using LP7_fastcormics function. Can you help me here?