Analysis comparing output of `tskit.lshmm` and Duncan's lshmm

szhan / onekg_analysis

Evaluation of genotype imputation methods using the unified genealogy dataset

MIT License

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Analysis comparing output of `tskit.lshmm` and Duncan's lshmm #25

Closed szhan closed 1 year ago

szhan commented 1 year ago

The paths copying from a reference panel to one query genome have equal likelihood. This shows that the two implementations produce paths that are in agreement with each other. Fixes #23