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szhan / onekg_analysis

Evaluation of genotype imputation methods using the unified genealogy dataset
MIT License
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Use Dask to distribute runs of `tskit.lshmm` #3

Closed szhan closed 1 year ago

szhan commented 1 year ago

Instead of running tskit.lshmm sequentially on each sample genome, use Dask to distribute the jobs locally, one job per sample genome.

szhan commented 1 year ago

Addressed in a separate repo (see tsimpute issue 106). It is easiest to use concurrent.futures instead.