szhan / tsimpute

Genome-wide genotype imputation using tree sequences.
MIT License
0 stars 0 forks source link

Add arguments to set bounds when visualising sample paths #147

Closed szhan closed 1 year ago

szhan commented 1 year ago

When the number of data points get too large, bokeh gets slow, so it would be useful to have arguments to bound parent node id and/or genomic position/site index when calling create_sample_path_vis_app.

I think the following argument should suffice:

Default should be the full ranges.

szhan commented 1 year ago

I'll leave implementing range_site_ids=(min, max) as a separate issue.