szhan / tsimpute

Genome-wide genotype imputation using tree sequences.
MIT License
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Tracks above sample path encodes nucleotide bases and presence/absence #150

Closed szhan closed 1 year ago

szhan commented 1 year ago

Enhances create_sample_path_vis_app. The tracks are now a list of dictionaries, each with two keys, site_pos and site_base. The value of site_pos can take values -2, -1, 1, 2, 3, 4, which are internally mapped to colors gray, white, blue, orange, green, and red.