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szhan / tsimpute

Genome-wide genotype imputation using tree sequences.
MIT License
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Visualise imputation performance #67

Open szhan opened 1 year ago

szhan commented 1 year ago

Some plotting routines should help to examine imputation results. A common way to look at imputation results is to look at imputation quality over MAF.

For example, Screen Shot 2023-06-05 at 10 01 29 AM

hyanwong commented 1 year ago

What's the colour here? Is yellow simply a high density of points?

szhan commented 1 year ago

Make the plots interactive using bokeh.