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szpiech / selscan

Haplotype based scans for selection
GNU General Public License v3.0
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returning iHH0/iHH1 values for right vs. left? #12

Closed josephvitti closed 9 years ago

josephvitti commented 9 years ago

Currently, selscan returns iHH for each variant at a site, as well as the unstandardized iHS. In calculating these former two values, selscan presumably first calculates iHH to the left and the right for each variant. Is it possible to return these intermediate values (iHH0_left, iHH0_right, iHH1_left, iHH_right) as well?

tomkinsc commented 9 years ago

This is present in the commits contained in pull request #13.

szpiech commented 9 years ago

Excellent, thank you.