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szpiech / selscan

Haplotype based scans for selection
GNU General Public License v3.0
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Core dump when using --nsl in norm #25

Closed mruehlemann closed 7 years ago

mruehlemann commented 7 years ago

Using the --nsl flag in norm causes the program to crash when the normalisation starts. Using the --ihs flag on the same data works:

ERROR: No such file or directoryterminate called after throwing an instance of 'int' Aborted (core dumped)

bfraser8 commented 7 years ago

I'm having the same problem and would love to know if there's a difference between the norm procedure for the different stats. Thanks!

szpiech commented 7 years ago

Thanks for finding this. The nSL and iHS normalization routines are identical, so you can use --ihs in the mean time to normalize nSL data. I'll fix --nsl ASAP.

szpiech commented 7 years ago

Okay, this ought to be fixed now with norm v1.2.1.