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szpiech / selscan

Haplotype based scans for selection
GNU General Public License v3.0
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about the ehh output file #37

Closed simengYu closed 5 years ago

simengYu commented 5 years ago

The out file of ehh includes 'physicalPos' 'geneticPos' '1ehh' '0ehh',but my data has 5 columns .I want to konw what the last column of data means. My out file like this: -7622 -0.007622 0.790850 0.346774 0.239184 -7398 -0.007398 0.790850 0.356855 0.243265 -1961 -0.001961 0.790850 0.502016 0.302041 -1143 -0.001143 1.000000 0.502016 0.328163 -549 -0.000549 1.000000 0.514113 0.333061 -153 -0.000153 1.000000 0.824597 0.458776 0 0.000000 1.000000 1.000000 0.124898 667 0.000667 1.000000 0.612903 0.373061 890 0.000890 1.000000 0.580645 0.360000

szpiech commented 5 years ago

Sorry, I seem to have failed to identify this column in the manual. The last column is the EHH of the entire sample.