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sztup / scarHRD

MIT License
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Err in scar_score #24

Open qquuzhao opened 2 years ago

qquuzhao commented 2 years ago

Error in if (!is.na(mat[x, ]$Bf) & !is.na(mat[x, ]$sd.Bf/sqrt(mat[x, ]$weight.Bf))) { : Calls: scar_score ... lapply -> FUN -> baf.bayes -> mapply -> Warning messages: 1: In b[which(diff(b) == 0) + 1] <- b[diff(b) == 0] + offset : 2: In b[which(diff(b) == 0) + 1] <- b[diff(b) == 0] + offset : 3: In max(segs.all$sd.BAF, na.rm = TRUE) : how to change the problem~

wolverinelei commented 1 year ago

I have the same error, have you solved it?

abhijitswain09 commented 4 months ago

Preprocessing started... Error in sequenza.extract(seg, chromosome.list = paste("chr", c(1:24), : unused arguments (gamma = 60, kmin = 50)