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t-sakashita / rokko

Integrated Interface for libraries of eigenvalue decomposition
Boost Software License 1.0
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Trilinos14.0.0をOpenBLASを使ってコンパイルした時にエラー #602

Open t-sakashita opened 1 year ago

t-sakashita commented 1 year ago 
[ 17%] Linking CXX shared library libepetra.dylib
cd /Users/sakashitatatsuya/build/trilinos-14.0.0-build-Release/packages/epetra/src && /opt/local/bin/cmake -E cmake_link_script CMakeFiles/epetra.dir/link.txt --verbose=1
/opt/local/bin/mpicxx -O3 -DNDEBUG -isysroot /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX12.1.sdk -mmacosx-version-min=11.7 -dynamiclib -Wl,-headerpad_max_install_names -compatibility_version 14.0.0 -current_version 14.0.0 -o libepetra.14.0.dylib -install_name @rpath/libepetra.14.dylib CMakeFiles/epetra.dir/Epetra_BLAS.cpp.o CMakeFiles/epetra.dir/Epetra_BasicDirectory.cpp.o CMakeFiles/epetra.dir/Epetra_BasicRowMatrix.cpp.o CMakeFiles/epetra.dir/Epetra_BlockMap.cpp.o CMakeFiles/epetra.dir/Epetra_BlockMapData.cpp.o CMakeFiles/epetra.dir/Epetra_C_wrappers.cpp.o CMakeFiles/epetra.dir/Epetra_CompObject.cpp.o CMakeFiles/epetra.dir/Epetra_CrsGraph.cpp.o CMakeFiles/epetra.dir/Epetra_CrsGraphData.cpp.o CMakeFiles/epetra.dir/Epetra_CrsMatrix.cpp.o CMakeFiles/epetra.dir/Epetra_CrsSingletonFilter.cpp.o CMakeFiles/epetra.dir/Epetra_Data.cpp.o CMakeFiles/epetra.dir/Epetra_DistObject.cpp.o CMakeFiles/epetra.dir/Epetra_Export.cpp.o CMakeFiles/epetra.dir/Epetra_FECrsGraph.cpp.o CMakeFiles/epetra.dir/Epetra_FECrsMatrix.cpp.o CMakeFiles/epetra.dir/Epetra_FEVbrMatrix.cpp.o CMakeFiles/epetra.dir/Epetra_FEVector.cpp.o CMakeFiles/epetra.dir/Epetra_Flops.cpp.o CMakeFiles/epetra.dir/Epetra_Fortran_wrappers.cpp.o CMakeFiles/epetra.dir/Epetra_Import.cpp.o CMakeFiles/epetra.dir/Epetra_Import_Util.cpp.o CMakeFiles/epetra.dir/Epetra_IntMultiVector.cpp.o CMakeFiles/epetra.dir/Epetra_IntSerialDenseMatrix.cpp.o CMakeFiles/epetra.dir/Epetra_IntSerialDenseVector.cpp.o CMakeFiles/epetra.dir/Epetra_IntVector.cpp.o CMakeFiles/epetra.dir/Epetra_JadMatrix.cpp.o CMakeFiles/epetra.dir/Epetra_LAPACK.cpp.o CMakeFiles/epetra.dir/Epetra_LinearProblem.cpp.o CMakeFiles/epetra.dir/Epetra_LocalMap.cpp.o CMakeFiles/epetra.dir/Epetra_Map.cpp.o CMakeFiles/epetra.dir/Epetra_MapColoring.cpp.o CMakeFiles/epetra.dir/Epetra_MultiVector.cpp.o CMakeFiles/epetra.dir/Epetra_Object.cpp.o CMakeFiles/epetra.dir/Epetra_OffsetIndex.cpp.o CMakeFiles/epetra.dir/Epetra_RowMatrixTransposer.cpp.o CMakeFiles/epetra.dir/Epetra_SerialComm.cpp.o CMakeFiles/epetra.dir/Epetra_SerialCommData.cpp.o CMakeFiles/epetra.dir/Epetra_SerialDenseMatrix.cpp.o CMakeFiles/epetra.dir/Epetra_SerialDenseSVD.cpp.o CMakeFiles/epetra.dir/Epetra_SerialDenseSolver.cpp.o CMakeFiles/epetra.dir/Epetra_SerialDenseVector.cpp.o CMakeFiles/epetra.dir/Epetra_SerialDistributor.cpp.o CMakeFiles/epetra.dir/Epetra_SerialSpdDenseSolver.cpp.o CMakeFiles/epetra.dir/Epetra_SerialSymDenseMatrix.cpp.o CMakeFiles/epetra.dir/Epetra_Time.cpp.o CMakeFiles/epetra.dir/Epetra_Util.cpp.o CMakeFiles/epetra.dir/Epetra_VbrMatrix.cpp.o CMakeFiles/epetra.dir/Epetra_Vector.cpp.o CMakeFiles/epetra.dir/Epetra_LongLongSerialDenseMatrix.cpp.o CMakeFiles/epetra.dir/Epetra_LongLongSerialDenseVector.cpp.o CMakeFiles/epetra.dir/Epetra_LongLongVector.cpp.o CMakeFiles/epetra.dir/Epetra_dcrsmm.f.o CMakeFiles/epetra.dir/Epetra_dcrsmv.f.o CMakeFiles/epetra.dir/Epetra_dcrssm.f.o CMakeFiles/epetra.dir/Epetra_dcrssv.f.o CMakeFiles/epetra.dir/Epetra_MpiComm.cpp.o CMakeFiles/epetra.dir/Epetra_MpiCommData.cpp.o CMakeFiles/epetra.dir/Epetra_MpiDistributor.cpp.o   -L/opt/local/lib/gcc12/gcc/x86_64-apple-darwin20/12.3.0  -L/opt/local/lib/gcc12  -Wl,-rpath,/Users/sakashitatatsuya/build/trilinos-14.0.0-build-Release/packages/teuchos/numerics/src -Wl,-rpath,/Users/sakashitatatsuya/build/trilinos-14.0.0-build-Release/packages/teuchos/remainder/src -Wl,-rpath,/Users/sakashitatatsuya/build/trilinos-14.0.0-build-Release/packages/teuchos/kokkoscomm/src -Wl,-rpath,/Users/sakashitatatsuya/build/trilinos-14.0.0-build-Release/packages/teuchos/comm/src -Wl,-rpath,/Users/sakashitatatsuya/build/trilinos-14.0.0-build-Release/packages/teuchos/kokkoscompat/src -Wl,-rpath,/Users/sakashitatatsuya/build/trilinos-14.0.0-build-Release/packages/teuchos/parameterlist/src -Wl,-rpath,/Users/sakashitatatsuya/build/trilinos-14.0.0-build-Release/packages/teuchos/parser/src -Wl,-rpath,/Users/sakashitatatsuya/build/trilinos-14.0.0-build-Release/packages/teuchos/core/src -Wl,-rpath,/Users/sakashitatatsuya/build/trilinos-14.0.0-build-Release/packages/kokkos/core/src ../../teuchos/numerics/src/libteuchosnumerics.14.0.dylib /opt/local/lib/libopenblas.dylib /opt/local/lib/libopenblas.dylib ../../teuchos/remainder/src/libteuchosremainder.14.0.dylib ../../teuchos/kokkoscomm/src/libteuchoskokkoscomm.14.0.dylib ../../teuchos/comm/src/libteuchoscomm.14.0.dylib ../../teuchos/kokkoscompat/src/libteuchoskokkoscompat.14.0.dylib ../../teuchos/parameterlist/src/libteuchosparameterlist.14.0.dylib ../../teuchos/parser/src/libteuchosparser.14.0.dylib ../../teuchos/core/src/libteuchoscore.14.0.dylib ../../kokkos/core/src/libkokkoscore.14.0.dylib /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX12.1.sdk/usr/lib/libdl.tbd -lmpifort -lgfortran -lgcc_s.1.1 -lgcc -lquadmath -lgcc_s.1.1 -lgcc 
Undefined symbols for architecture x86_64:
  "_dggsvd_", referenced from:
      Epetra_LAPACK::GGSVD(char, char, char, int, int, int, int*, int*, double*, int, double*, int, double*, double*, double*, int, double*, int, double*, int, double*, int*, int*) const in Epetra_LAPACK.cpp.o
  "_sggsvd_", referenced from:
      Epetra_LAPACK::GGSVD(char, char, char, int, int, int, int*, int*, float*, int, float*, int, float*, float*, float*, int, float*, int, float*, int, float*, int*, int*) const in Epetra_LAPACK.cpp.o
ld: symbol(s) not found for architecture x86_64
t-sakashita commented 1 year ago

リンクエラーとなったdggsvd関数は、deprecatedらしい。 https://www.eidos.ic.i.u-tokyo.ac.jp/~tau/lecture/parallel_distributed/2016/examples/09mm/OpenBLAS/lapack-netlib/SRC/DEPRECATED/

t-sakashita commented 1 year ago

Trilinos 13.4.1のインストールは成功した。 30ee94c936983a5a9127f4c2d665621ab2c708c2