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takaram / kofam_scan

CLI tool to annotate genes with KOfam
https://www.genome.jp/tools/kofamkoala/
MIT License
66 stars 11 forks source link

wrong number of arguments #35

Open WJT0925 opened 6 months ago

WJT0925 commented 6 months ago

~/software/KOALA/kofam_scan-1.3.0/bin/exec_annotation -o ./kofam.out -p ~/software/KOALA/kofam_scan-1.3.0/db/profiles -k ~/software/KOALA/kofam_scan-1.3.0/db/profiles/eukaryote.hal --cpu 5 --tmp-dir ./tmp -E 1e-5 -f detail-tsv Pshi.short.pep Traceback (most recent call last): 11: from /home/jingtian/software/KOALA/kofam_scan-1.3.0/bin/exec_annotation:7:in <main>' 10: from /home/jingtian/software/KOALA/kofam_scan-1.3.0/bin/lib/kofam_scan/cli.rb:21:inrun' 9: from /home/jingtian/software/KOALA/kofam_scan-1.3.0/bin/lib/kofam_scan/executor.rb:8:in execute' 8: from /home/jingtian/software/KOALA/kofam_scan-1.3.0/bin/lib/kofam_scan/executor.rb:22:inexecute' 7: from /home/jingtian/software/KOALA/kofam_scan-1.3.0/bin/lib/kofam_scan/executor.rb:80:in parse_ko' 6: from /home/jingtian/software/KOALA/kofam_scan-1.3.0/bin/lib/kofam_scan/executor.rb:80:inopen' 5: from /home/jingtian/software/KOALA/kofam_scan-1.3.0/bin/lib/kofam_scan/executor.rb:80:in block in parse_ko' 4: from /home/jingtian/software/KOALA/kofam_scan-1.3.0/bin/lib/kofam_scan/ko.rb:12:inparse' 3: from /home/jingtian/software/KOALA/kofam_scan-1.3.0/bin/lib/kofam_scan/ko.rb:12:in each_line' 2: from /home/jingtian/software/KOALA/kofam_scan-1.3.0/bin/lib/kofam_scan/ko.rb:15:inblock in parse' 1: from /home/jingtian/software/KOALA/kofam_scan-1.3.0/bin/lib/kofam_scan/ko.rb:15:in new' /home/jingtian/software/KOALA/kofam_scan-1.3.0/bin/lib/kofam_scan/ko.rb:35:ininitialize': wrong number of arguments (given 1, expected 12) (ArgumentError)

faye92sun commented 3 months ago

I'm having the same problem, hoping for a solution.