talgalili / dendextend

Extending R's Dendrogram Functionality
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Broken Dependency- viridis #73

Closed SEpapoulis closed 6 years ago

SEpapoulis commented 6 years ago

dendextend fails to download due to a dependency 'viridis'. You first must install viridisLite in order to successfully install. Credit goes to @kim-carter for the solution Currently, to install dentextend, you must do the following: install.packages("viridisLite")
install.packages("viridis") install.packages("dentextend")

talgalili commented 6 years ago

Thanks. I'll give it a look.

On Tue, Mar 20, 2018, 21:31 Spiridon Evangelos Papoulis < notifications@github.com> wrote:

dendextend fails to download due to a dependency 'viridis'. You first must install viridisLite in order to successfully install. Credit goes to @kim-carter https://github.com/kim-carter for the solution https://github.com/rstudio/leaflet/issues/494 Currently, to install dentextend, you must do the following: install.packages("viridisLite") install.packages("viridis") install.packages("dentextend")

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talgalili commented 6 years ago

odd, I just tried to download it (after removing viridis and viridisLite) and it worked for me. Can you reproduce your issue? (and if so, what is your sessionInfo() ?)

SEpapoulis commented 6 years ago

I am sorry for the confusion, but I cannot seem to reproduce it now either. I removed dendextend, viridis and viridisLite and then reinstalled dendextend successfully (both dependencies were appropriately flagged and downloaded). The original error was thrown when trying to install viridis- when installing it through a namespace error for viridisLite.

Here is session info, not sure how helpful it will be now that I cannot reproduce the error:

R version 3.4.4 (2018-03-15)
Platform: x86_64-pc-linux-gnu (64-bit)
Running under: Ubuntu 16.04.4 LTS

Matrix products: default
BLAS: /usr/lib/libblas/libblas.so.3.6.0
LAPACK: /usr/lib/lapack/liblapack.so.3.6.0

locale:
 [1] LC_CTYPE=en_US.UTF-8       LC_NUMERIC=C              
 [3] LC_TIME=en_US.UTF-8        LC_COLLATE=en_US.UTF-8    
 [5] LC_MONETARY=en_US.UTF-8    LC_MESSAGES=en_US.UTF-8   
 [7] LC_PAPER=en_US.UTF-8       LC_NAME=C                 
 [9] LC_ADDRESS=C               LC_TELEPHONE=C            
[11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C       

attached base packages:
[1] stats     graphics  grDevices utils     datasets  methods   base     

loaded via a namespace (and not attached):
[1] compiler_3.4.4 tools_3.4.4  
talgalili commented 6 years ago

Thanks. ok, I'll close this for now and we'll see if someone else reports a similar issue.

Cheers, T