talgalili / heatmaply

Interactive Heat Maps for R Using plotly
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Error with demo example: seriate_dendogram #19

Closed phillyo closed 8 years ago

phillyo commented 8 years ago

When trying to run the demo example using mtcars, I get:

Error: 'seriate_dendrogram' is not an exported object from 'namespace:dendextend'

Thanks for your help or fix, Philipp

this is my session info:

R version 3.2.3 (2015-12-10) Platform: x86_64-w64-mingw32/x64 (64-bit) Running under: Windows 7 x64 (build 7601) Service Pack 1

locale: [1] LC_COLLATE=German_Austria.1252 LC_CTYPE=German_Austria.1252
[3] LC_MONETARY=German_Austria.1252 LC_NUMERIC=C
[5] LC_TIME=German_Austria.1252

attached base packages: [1] stats graphics grDevices utils datasets methods base

other attached packages: [1] heatmaply_0.5.0 viridis_0.3.4 plotly_3.4.1 ggplot2_2.1.0

loaded via a namespace (and not attached): [1] Rcpp_0.12.2 plyr_1.8.3 base64enc_0.1-3 bitops_1.0-6
[5] iterators_1.0.8 tools_3.2.3 dendextend_1.1.8 digest_0.6.8
[9] jsonlite_0.9.19 gtable_0.2.0 foreach_1.4.3 DBI_0.4-1
[13] registry_0.3 parallel_3.2.3 seriation_1.2-0 TSP_1.1-4
[17] gridExtra_2.2.1 dplyr_0.4.3 httr_1.1.0 knitr_1.11
[21] cluster_2.0.3 htmlwidgets_0.6 gtools_3.5.0 caTools_1.17.1
[25] grid_3.2.3 R6_2.1.1 gdata_2.17.0 tidyr_0.4.1
[29] magrittr_1.5 whisker_0.3-2 scales_0.4.0 gplots_3.0.1
[33] codetools_0.2-14 gclus_1.3.1 htmltools_0.3.5 MASS_7.3-45
[37] assertthat_0.1 colorspace_1.2-6 KernSmooth_2.23-15 munsell_0.4.2

talgalili commented 8 years ago

Hi Phil, You seem to be using an old version of dendextend, could you please update your version to the latest one: install.packages("dendextend")

With regards, Tal

phillyo commented 8 years ago

of course! turns out it wasn't the only one that needed updating. thanks! in the meantime i played around with corrplot and plotly, but nowhere near this great package!!!

talgalili commented 8 years ago

Thanks Phil :)