SLEAP 1.3.3

[roomrys]

Description

Hotfix for 1.3.2 which had inadequate restrictions on the tensorflow dependencies for the sleap[pypi] extra. Also fixes an overlay issue and sets an environment variable upon activating the environment in conda packages for Linux.

Types of changes

• [x] Bugfix
• [ ] New feature
• [ ] Refactor / Code style update (no logical changes)
• [x] Build / CI changes
• [ ] Documentation Update
• [x] Other (dependencies)

Does this address any currently open issues?

• 1476

• 1495

Outside contributors checklist

• [ ] Review the guidelines for contributing to this repository
• [ ] Read and sign the CLA and add yourself to the authors list
• [ ] Make sure you are making a pull request against the develop branch (not main). Also you should start your branch off develop
• [ ] Add tests that prove your fix is effective or that your feature works
• [ ] Add necessary documentation (if appropriate)

Thank you for contributing to SLEAP!

:heart:

Summary by CodeRabbit

• New Feature: Switched to mamba package manager for faster environment creation in Conda.
• Bug Fix: Added exception handling in sleap/gui/overlays/base.py to prevent runtime errors when removing items from the scene.
• Documentation: Updated installation instructions and version numbers across various documentation files, including notebooks and markdown files.
• Chore: Updated the SLEAP version to 1.3.3 across all relevant files.
• Chore: Added shell scripts for setting and resetting library paths during environment activation and deactivation, improving GPU detection by TensorFlow on some systems.
• Chore: Updated dependencies in pypi_requirements.txt for better compatibility and stability.

[coderabbitai[bot]]

Walkthrough

This pull request primarily focuses on updating the SLEAP package from version 1.3.2 to 1.3.3 across various files, introducing mamba as a package manager, and improving error handling in the GUI. It also includes changes to handle TensorFlow 2.7+ detection issues and updates to dependencies.

Changes

File(s)	Summary
.conda/README.md, .conda/build.sh, .conda/sleap_activate.sh, .conda/sleap_deactivate.sh	Switched to mamba for package management and added scripts to manage library paths during environment activation/deactivation.
.github/ISSUE_TEMPLATE/bug_report.md, docs/conf.py, sleap/version.py	Updated SLEAP version from 1.3.2 to 1.3.3.
docs/installation.md, docs/notebooks/*.ipynb	Updated SLEAP installation instructions and commands across documentation and notebooks. Added instructions for handling TensorFlow 2.7+ detection issues.
pypi_requirements.txt	Updated dependencies with version constraints and platform-specific requirements.
sleap/gui/overlays/base.py	Improved error handling when removing items from the scene in the GUI.

🐇💻

With each update, we hop ahead, Fixing bugs, improving code, full speed ahead. Mamba now manages our packages neat, And TensorFlow issues we can beat. From 1.3.2 to 1.3.3 we leap, Making strides with SLEAP so deep. So here's to progress, swift and fine, In the world of code, everything's divine! 🎉🥕

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