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talmolab / sleap

A deep learning framework for multi-animal pose tracking.
https://sleap.ai
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Update installation docs 1.4.1 #1810

Closed roomrys closed 2 months ago

roomrys commented 5 months ago

Description

This PR attempts to update and simplify the installation instructions and:

This PR also attempts to handle the following tasks from

Types of changes

Does this address any currently open issues?

Outside contributors checklist

Thank you for contributing to SLEAP!

:heart:

Summary by CodeRabbit

coderabbitai[bot] commented 5 months ago

Walkthrough

This update primarily focuses on changing package management commands from mamba to conda within the .conda/README.md file. It also modifies the GitHub Actions workflow trigger, introduces the sphinx-tabs extension for documentation, adds styling for tabbed interfaces in the docs, and refines version constraints in dev_requirements.txt. Additionally, the installation instructions in docs/installation.md have been streamlined and clarified.

Changes

Files/Paths Change Summaries
.conda/README.md Updated commands from mamba to conda for environment creation/installation.
.github/workflows/website.yml Modified branch trigger and removed comments related to myst_nb and lxml.
dev_requirements.txt Updated version constraints for dependencies and added new packages.
docs/_static/css/tabs.css Introduced styling for tabs, defining appearance and behavior.
docs/conf.py Added sphinx_tabs.tabs, updated CSS files, and settings for tabbed content.
docs/installation.md Streamlined installation instructions, emphasizing conda over mamba.

Poem

🌟 In code's quiet dance, a change so grand,
mamba steps back, conda takes the stand.
Tabs now gleam with a stylish twist,
Clearer paths in docs, not to be missed!
🐰 With code so sleek, the future we kissed.

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codecov[bot] commented 2 months ago

Codecov Report

All modified and coverable lines are covered by tests :white_check_mark:

Project coverage is 75.33%. Comparing base (7ed1229) to head (87d05b4). Report is 47 commits behind head on develop.

Additional details and impacted files ```diff @@ Coverage Diff @@ ## develop #1810 +/- ## =========================================== + Coverage 73.30% 75.33% +2.02% =========================================== Files 134 133 -1 Lines 24087 24476 +389 =========================================== + Hits 17658 18440 +782 + Misses 6429 6036 -393 ```

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