Currently, the -k eo option in the launch.sh cluster command outputs STDERR and STDOUT logs to the user home dir instead of a more sensible location inside the analysis dir. Also, Jeff says that the -k option places unnecessary strain on the filesystem as it is keeping write open during execution, instead of copying log upon job completion.
Should replace with -o {path} -e {path} instead if possible.
Currently, the
-k eooption in the launch.sh cluster command outputs STDERR and STDOUT logs to the user home dir instead of a more sensible location inside the analysis dir. Also, Jeff says that the -k option places unnecessary strain on the filesystem as it is keeping write open during execution, instead of copying log upon job completion.Should replace with
-o {path} -e {path}instead if possible.