search

tanaylab / metacell

Metacell - Single-cell mRNA Analysis
https://tanaylab.github.io/metacell
Other
107 stars 30 forks source link

mcell_add_gene_stat #71

Open chenx9 opened 2 years ago

chenx9 commented 2 years ago

when I run this step ,I get: mcell_add_gene_stat(gstat_id="test", mat_id="test", force=T) Calculating gene statistics... will downsamp done downsamp will gen mat_n done gen mat_n done computing basic gstat, will compute trends Error in $<-.data.frame(*tmp*, "sz_cor", value = c(A1BG = -0.001, : replacement has 26837 rows, data has 18447 In addition: Warning message: In mclapply(argsList, FUN, mc.preschedule = preschedule, mc.set.seed = set.seed, : scheduled cores 1, 2, 3, 5, 7 did not deliver results, all values of the jobs will be affected

f6v commented 2 years ago

I have the same issue when trying to run the melanoma paper code https://github.com/tanaylab/li_et_al_cell_2018_melanoma_scrna/issues/1

@chenx9 have you ever figured this out?

Judikael-Saout commented 1 year ago

Hi,

I also have this error, has anyone managed to solve it? @f6v @chenx9

f6v commented 1 year ago

@Judikael-Saout not really.